General
Preferred name
WEHI-539
Synonyms
WEHI539 ()
WEHI-539 hydrochloride ()
WEHI-539 ()
P&D ID
PD013392
CAS
2070018-33-4
1431866-33-9
Tags
available
probe
Probe info
Probe type
experimental probe
Probe targets
[[ compound.targets[t].gene_name ]]
Probe control
Probe control not defined
Orthogonal probes
8
No orthogonal probes found
Similar probes
4
No structurally similar probes found
Structure formats
[[ format ]]
[[ compound[format === 'MOL' ? 'molblock' : format.toLowerCase()] ]]
Description
(extracted from source data)
COMMENT
WEHI-539 is an inhibitor of BCL-2 family proteins, binding potently and selectively to BCL-XL with an IC50 of ~1.1 nM. It was the first small molecule that selectively antagonizes the prosurvival activity of BCL-XL with nM potency. The discovery of WEHI-539 provided a valuable tool for shedding light on BCL-XL and apoptosis & tumor growth. The solubility of this compound in DMSO is >10 mM; its molecular weight is 583.7, Log P = 6.86 (CLogP = 3.81), tPSA = 121.66. It is highly protein bound, likely has poor in vivo properties and has a labile and potentially toxic hydrazone moiety. It is currently one of three BCL-XL inhibitor probes being investigated (along with A-1155463 & A-1331852); In general, they all have similar physicochemical properties (but the two AbbVie compounds are devoid of the hydrazone moiety). Platelets are known to depend on BCL-XL for their survival, and WEHI-539 induced apoptosis in both mouse (0-3 uM) and human platelets (log uM=0.01 to 100); this activity could be inhibited by a broad-spectrum caspase inhibitor (Nat Chem Biol 2013, 9,390-397). This compound is a valuable in-cell probe. Unfortunately, because of its size, its protein binding affinity, its lipophilicity and, in general, poor physicochemical properties and the fact that it contains a hydrazone moiety, which will likely have stability issues in vivo, it will not be a good in vivo probe. Aug 3 2017 - 5:04pm; WEHI-539 has a good potency (~1.4 nM) and a good selectivity over other BCL-2 family proteins. It is a good cellular probe as it induces apoptosis in both mouse and human platelets which is a biomarker for BCL-XL. It is not recommended for use in vivo due to poor physicochemical properties. Another BCL-XL (A-11155463) is more suitable as an in vivo probe due to lack of hydrazone moiety. Mar 12 2020 - 12:04pm
DESCRIPTION
WEHI-539 hydrochloride is a selective inhibitor of Bcl-XL with an IC50 of 1.1 nM.
MOA
Inhibitor
(Chemical Probes.org)
DESCRIPTION
WEHI-539 is a selective BCL-XL inhibitor that can function as a single-agent inducer of apoptosis while sparing normal cells. WEHI-539 provokes BAK-mediated apoptosis in BCL-XL-dependent cells.
(BOC Sciences Bioactive Compounds)
[[ p.pathway_name ]]
[[ compound.targets[tid].gene_name ]]
Compound Sets
8
BOC Sciences Bioactive Compounds
Cayman Chemical Bioactives
Chemical Probes.org
CZ-OPENSCREEN Bioactive Library
EUbOPEN Chemogenomics Library
High-quality chemical probes
MedChem Express Bioactive Compound Library
Nature Chemical Biology Probes
[[ a.name ]]
[[ ligand_id ]]
free of charge
External IDs
20
Molecular Weight
583.17
Hydrogen Bond Acceptors
9
Hydrogen Bond Donors
3
Rotatable Bonds
10
Ring Count
6
Aromatic Ring Count
5
cLogP
6.74
TPSA
122.72
Fraction CSP3
0.23
Chiral centers
0.0
Largest ring
6.0
QED
0.12
Structural alerts
0
No structural alerts detected
Custom attributes
(extracted from source data)
Target
Bcl-2 Family
BCL2L1
Pathway
Apoptosis
Orthogonal probe
A-1155463
Target subclass
Apoptosis Regulator
Recommended Cell Concentration
None
Source data

